Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | CAY62_RS19870 | Not Available | Negative | 9072 - 9848 | 27891.7 |
| is1 family transposase | CAY62_RS19875 | Not Available | Negative | 10042 - 10212 | 6442.68 |
| repb family plasmid replication initiator protein | CAY62_RS19880 | Not Available | Negative | 10597 - 11469 | 32791.9 |
| putative transporter | CAY62_RS19885 | Not Available | Positive | 12232 - 13236 | 39161.9 |
| tonb-dependent siderophore receptor | CAY62_RS19890 | Not Available | Positive | 13244 - 15364 | 79540.4 |
| hypothetical protein | CAY62_RS19895 | Not Available | Positive | 15407 - 15850 | 17478.9 |
| h-ns family nucleoid-associated regulatory protein | CAY62_RS19900 | Not Available | Positive | 16069 - 16461 | 15283.2 |
| duf2913 family protein | CAY62_RS19905 | Not Available | Negative | 17118 - 17777 | 25443.0 |
| hypothetical protein | CAY62_RS19910 | Not Available | Negative | 17847 - 18044 | 7437.03 |
| hypothetical protein | CAY62_RS19915 | Not Available | Negative | 18078 - 18368 | 11118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
