Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhlb | CAY62_RS14670 | Not Available | Negative | 3101553 - 3102857 | 48856.5 |
| thioredoxin trxa | CAY62_RS14675 | Not Available | Positive | 3102970 - 3103296 | 11597.0 |
| transcription termination factor rho | CAY62_RS14680 | Not Available | Positive | 3103508 - 3104767 | 46873.8 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | CAY62_RS14685 | Not Available | Positive | 3104964 - 3106820 | 69558.8 |
| 2fe-2s iron-sulfur cluster-binding protein | CAY62_RS14690 | Not Available | Positive | 3106879 - 3107145 | 9904.16 |
| nad(p)h-flavin reductase | CAY62_RS14695 | Not Available | Positive | 3107153 - 3107857 | 25809.7 |
| carboxylate/amino acid/amine transporter | CAY62_RS14700 | Not Available | Negative | 3107953 - 3108846 | 32905.1 |
| universal stress protein | CAY62_RS14705 | Not Available | Negative | 3108958 - 3109380 | 15405.6 |
| non-heme ferritin | CAY62_RS14710 | Not Available | Positive | 3109635 - 3110162 | 19842.5 |
| universal stress protein uspb | CAY62_RS14715 | Not Available | Positive | 3110248 - 3110586 | 12897.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
