Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding protein mioc | CAY62_RS14270 | Not Available | Positive | 3017146 - 3017586 | 15845.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CAY62_RS14275 | Not Available | Positive | 3018023 - 3019912 | 70066.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CAY62_RS14280 | Not Available | Positive | 3019922 - 3020542 | 23326.2 |
| para family protein | CAY62_RS14285 | Not Available | Positive | 3020559 - 3021356 | 28950.9 |
| parb/repb/spo0j family partition protein | CAY62_RS14290 | Not Available | Positive | 3021373 - 3022254 | 32286.0 |
| f0f1 atp synthase subunit i | CAY62_RS14295 | Not Available | Positive | 3022439 - 3022828 | 13913.8 |
| f0f1 atp synthase subunit a | CAY62_RS14300 | Not Available | Positive | 3022837 - 3023622 | 28869.2 |
| f0f1 atp synthase subunit c | CAY62_RS14305 | Not Available | Positive | 3023691 - 3023948 | 8691.19 |
| f0f1 atp synthase subunit b | CAY62_RS14310 | Not Available | Positive | 3024025 - 3024495 | 17324.0 |
| f0f1 atp synthase subunit delta | CAY62_RS14315 | Not Available | Positive | 3024511 - 3025044 | 19427.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
