Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | CAY62_RS13265 | Not Available | Negative | 2811798 - 2812010 | 7760.18 |
| primosomal protein n' | CAY62_RS13270 | Not Available | Positive | 2812252 - 2814456 | 81963.7 |
| dna-binding transcriptional regulator cytr | CAY62_RS13275 | Not Available | Positive | 2814658 - 2815662 | 36494.2 |
| cell division protein ftsn | CAY62_RS13280 | Not Available | Positive | 2815829 - 2816698 | 32215.4 |
| group ii intron reverse transcriptase/maturase | CAY62_RS13285 | Not Available | Negative | 2816725 - 2818017 | 49752.3 |
| atp-dependent protease subunit hslv | CAY62_RS13290 | Not Available | Positive | 2818721 - 2819248 | 19087.9 |
| hslu--hslv peptidase atpase subunit | CAY62_RS13295 | Not Available | Positive | 2819259 - 2820590 | 49966.0 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | CAY62_RS13300 | Not Available | Positive | 2820731 - 2821645 | 32305.2 |
| ribonuclease e activity regulator rraa | CAY62_RS13305 | Not Available | Positive | 2821770 - 2822255 | 17306.2 |
| cell division protein zapb | CAY62_RS13310 | Not Available | Negative | 2822342 - 2822584 | 9259.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
