Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS15865 | Not Available | Positive | 224391 - 224789 | 15175.4 |
| hypothetical protein | CAY62_RS15870 | Not Available | Positive | 224918 - 225166 | 9516.59 |
| dass family sodium-coupled anion symporter | CAY62_RS15875 | Not Available | Positive | 225386 - 226807 | 50602.6 |
| hypothetical protein | CAY62_RS15880 | Not Available | Negative | 226873 - 227160 | 11067.0 |
| hypothetical protein | CAY62_RS15885 | Not Available | Negative | 227196 - 228275 | 42213.1 |
| hypothetical protein | CAY62_RS15890 | Not Available | Positive | 228548 - 228754 | 7879.11 |
| enoyl-coa hydratase/isomerase family protein | CAY62_RS15895 | Not Available | Positive | 228898 - 230040 | 42412.5 |
| sdr family oxidoreductase | CAY62_RS15900 | Not Available | Positive | 230061 - 230819 | 27306.9 |
| yibl family ribosome-associated protein | CAY62_RS15905 | Not Available | Negative | 231074 - 231430 | 13446.5 |
| divalent-cation tolerance protein cuta | CAY62_RS15910 | Not Available | Positive | 231546 - 231881 | 12582.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
