Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent dna methyltransferase | CAY62_RS15710 | Not Available | Negative | 189340 - 190083 | 28550.5 |
| duf2541 family protein | CAY62_RS15715 | Not Available | Positive | 190470 - 190859 | 14772.9 |
| sulfatase-like hydrolase/transferase | CAY62_RS15720 | Not Available | Positive | 191305 - 191718 | 15904.5 |
| mfs transporter | CAY62_RS15735 | Not Available | Negative | 192396 - 193562 | 41357.2 |
| serine hydrolase domain-containing protein | CAY62_RS15740 | Not Available | Negative | 194106 - 194684 | 21391.8 |
| molybdate abc transporter permease subunit | CAY62_RS15745 | Not Available | Positive | 195017 - 195706 | 25011.4 |
| molybdenum abc transporter atp-binding protein modc | CAY62_RS15750 | Not Available | Positive | 195706 - 196800 | 40804.5 |
| duf2955 domain-containing protein | CAY62_RS15755 | Not Available | Negative | 196944 - 197969 | 37575.8 |
| hlyd family secretion protein | CAY62_RS15760 | Not Available | Negative | 197994 - 199061 | 39573.1 |
| lysr family transcriptional regulator | CAY62_RS15765 | Not Available | Positive | 199165 - 200043 | 33062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
