Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS20490 | Not Available | Positive | 22607 - 23764 | 43490.1 |
| hypothetical protein | CAY62_RS20495 | Not Available | Positive | 23754 - 24425 | 24321.0 |
| gspe/pule family protein | CAY62_RS20500 | Not Available | Positive | 24418 - 26064 | 61711.9 |
| hypothetical protein | CAY62_RS20505 | Not Available | Positive | 26042 - 27076 | 37880.9 |
| hypothetical protein | CAY62_RS20510 | Not Available | Positive | 27113 - 27679 | 20307.4 |
| hypothetical protein | CAY62_RS20515 | Not Available | Positive | 27681 - 28184 | 18503.2 |
| type ii secretion system protein | CAY62_RS20520 | Not Available | Positive | 28181 - 29131 | 36086.2 |
| hypothetical protein | CAY62_RS20525 | Not Available | Positive | 29153 - 29560 | 15254.9 |
| trypsin-like serine protease | CAY62_RS20530 | Not Available | Positive | 29722 - 30783 | 37773.6 |
| hypothetical protein | CAY62_RS20535 | Not Available | Positive | 30801 - 31076 | 10546.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
