Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf368 domain-containing protein | CAY62_RS15325 | Not Available | Negative | 110050 - 110967 | 33167.8 |
| hypothetical protein | CAY62_RS15330 | Not Available | Positive | 111258 - 111482 | 8566.21 |
| is630 family transposase | CAY62_RS15335 | Not Available | Negative | 111452 - 112483 | 39175.8 |
| voc family protein | CAY62_RS15340 | Not Available | Positive | 112816 - 113211 | 15250.1 |
| hypothetical protein | CAY62_RS15345 | Not Available | Negative | 113246 - 113863 | 23932.9 |
| cupin domain-containing protein | CAY62_RS15350 | Not Available | Positive | 114499 - 114867 | 13827.1 |
| formate dehydrogenase subunit alpha | CAY62_RS15355 | Not Available | Positive | 115233 - 119390 | 152150.0 |
| hypothetical protein | CAY62_RS15360 | Not Available | Positive | 119531 - 119890 | 13263.7 |
| hypothetical protein | CAY62_RS15365 | Not Available | Positive | 121137 - 121355 | 8814.75 |
| cyclic diguanylate phosphodiesterase | CAY62_RS15370 | Not Available | Positive | 121321 - 122787 | 55641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
