Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pullulanase-type alpha-1,6-glucosidase | CAY62_RS15220 | Not Available | Positive | 86177 - 89362 | 117898.0 |
| glycoside hydrolase family 36 protein | CAY62_RS15225 | Not Available | Positive | 89561 - 91279 | 64535.6 |
| malm family protein | CAY62_RS15230 | Not Available | Negative | 91388 - 92203 | 29411.9 |
| maltoporin | CAY62_RS15235 | Not Available | Negative | 92306 - 93550 | 45233.3 |
| hypothetical protein | CAY62_RS15240 | Not Available | Negative | 94181 - 94360 | 7198.2 |
| maltose/maltodextrin abc transporter atp-binding protein malk | CAY62_RS15245 | Not Available | Negative | 94637 - 95743 | 40890.5 |
| maltose/maltodextrin abc transporter substrate-binding protein male | CAY62_RS15250 | Not Available | Positive | 96172 - 97353 | 42478.5 |
| maltose abc transporter permease malf | CAY62_RS15255 | Not Available | Positive | 97474 - 99018 | 56706.7 |
| maltose abc transporter permease malg | CAY62_RS15260 | Not Available | Positive | 99030 - 99920 | 32020.1 |
| iron-sulfur cluster assembly accessory protein | CAY62_RS15265 | Not Available | Positive | 100287 - 100655 | 13384.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
