Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | CAY62_RS15170 | Not Available | Positive | 75345 - 76709 | 48927.1 |
| mota/tolq/exbb proton channel family protein | CAY62_RS15175 | Not Available | Positive | 76709 - 77242 | 20039.8 |
| exbd/tolr family protein | CAY62_RS15180 | Not Available | Positive | 77239 - 77643 | 14686.6 |
| energy transducer tonb | CAY62_RS15185 | Not Available | Positive | 77660 - 78316 | 23873.1 |
| tetratricopeptide repeat protein | CAY62_RS15190 | Not Available | Positive | 78313 - 79491 | 44610.1 |
| class ii fumarate hydratase | CAY62_RS15195 | Not Available | Negative | 79671 - 81056 | 49078.1 |
| amidohydrolase | CAY62_RS15200 | Not Available | Negative | 81135 - 82274 | 42314.2 |
| pepsy domain-containing protein | CAY62_RS15205 | Not Available | Positive | 82427 - 82687 | 9694.57 |
| glucose-1-phosphate adenylyltransferase | CAY62_RS15210 | Not Available | Positive | 83202 - 84419 | 45124.1 |
| glycogen synthase glga | CAY62_RS15215 | Not Available | Positive | 84409 - 85926 | 57040.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
