Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione binding-like protein | CAY62_RS14910 | Not Available | Negative | 20857 - 21525 | 25529.7 |
| tonb-dependent receptor family protein | CAY62_RS14915 | Not Available | Positive | 21807 - 23798 | 74071.4 |
| abc transporter substrate-binding protein | CAY62_RS14920 | Not Available | Positive | 23878 - 24945 | 40290.8 |
| rossmann-like domain-containing protein | CAY62_RS14925 | Not Available | Negative | 25065 - 26090 | 37018.4 |
| cupin domain-containing protein | CAY62_RS14930 | Not Available | Negative | 26181 - 26504 | 12156.8 |
| methyltransferase domain-containing protein | CAY62_RS14935 | Not Available | Negative | 26497 - 27312 | 30716.8 |
| crp/fnr family transcriptional regulator | CAY62_RS14940 | Not Available | Positive | 27508 - 28182 | 25470.4 |
| yhgn family naat transporter | CAY62_RS14945 | Not Available | Negative | 28239 - 28844 | 22357.5 |
| gnat family n-acetyltransferase | CAY62_RS14950 | Not Available | Negative | 29518 - 30018 | 18936.6 |
| molybdate abc transporter substrate-binding protein | CAY62_RS14955 | Not Available | Positive | 30458 - 31225 | 27707.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
