Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intermembrane transport protein pqib | CAY62_RS14860 | Not Available | Positive | 10224 - 11867 | 60254.9 |
| membrane integrity-associated transporter subunit pqic | CAY62_RS14865 | Not Available | Positive | 11870 - 12433 | 20566.7 |
| hypothetical protein | CAY62_RS22260 | Not Available | Positive | 12871 - 13029 | 5771.03 |
| hypothetical protein | CAY62_RS14875 | Not Available | Positive | 13328 - 13588 | 9596.58 |
| glxa family transcriptional regulator | CAY62_RS14880 | Not Available | Negative | 13672 - 14655 | 37191.5 |
| beta-ketoacyl synthase | CAY62_RS14885 | Not Available | Positive | 14814 - 16670 | 66133.5 |
| dead/deah box helicase | CAY62_RS14890 | Not Available | Negative | 16810 - 18102 | 48328.5 |
| hypothetical protein | CAY62_RS14895 | Not Available | Positive | 18436 - 18861 | 15743.5 |
| ribosome biogenesis gtpase ylqf | CAY62_RS14900 | Not Available | Negative | 18933 - 19886 | 36283.9 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | CAY62_RS14905 | Not Available | Positive | 20324 - 20725 | 15182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
