Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS21035 | Not Available | Negative | 53028 - 53225 | 7509.09 |
| hypothetical protein | CAY62_RS21040 | Not Available | Negative | 53259 - 53549 | 11164.2 |
| hypothetical protein | CAY62_RS21045 | Not Available | Negative | 53570 - 54463 | 32765.2 |
| hypothetical protein | CAY62_RS21050 | Not Available | Negative | 54783 - 55082 | 11366.0 |
| aaa family atpase | CAY62_RS21055 | Not Available | Negative | 55075 - 55710 | 23738.4 |
| hypothetical protein | CAY62_RS21065 | Not Available | Positive | 56319 - 57245 | 35454.1 |
| hypothetical protein | CAY62_RS21070 | Not Available | Positive | 57297 - 57509 | 8433.18 |
| clbs/dfsb family four-helix bundle protein | CAY62_RS21075 | Not Available | Positive | 57687 - 57848 | 6258.48 |
| hypothetical protein | CAY62_RS21080 | Not Available | Positive | 57878 - 58258 | 14090.8 |
| duf2971 domain-containing protein | CAY62_RS21085 | Not Available | Positive | 58455 - 59288 | 32592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
