Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS20990 | Not Available | Negative | 38529 - 38918 | 14539.3 |
| type iv conjugative transfer system coupling protein trad | CAY62_RS20995 | Not Available | Positive | 39023 - 41152 | 81616.1 |
| hypothetical protein | CAY62_RS21720 | Not Available | Negative | 41227 - 41373 | 5072.48 |
| conjugative transfer relaxase/helicase trai | CAY62_RS21000 | Not Available | Positive | 41569 - 47511 | 223363.0 |
| hypothetical protein | CAY62_RS21005 | Not Available | Negative | 47546 - 47908 | 14035.8 |
| hypothetical protein | CAY62_RS21010 | Not Available | Negative | 49327 - 49629 | 11470.5 |
| hypothetical protein | CAY62_RS21015 | Not Available | Negative | 49701 - 49949 | 9524.6 |
| hypothetical protein | CAY62_RS21020 | Not Available | Negative | 49946 - 50491 | 20554.8 |
| h-ns family nucleoid-associated regulatory protein | CAY62_RS21025 | Not Available | Positive | 51240 - 51632 | 15283.2 |
| duf2913 family protein | CAY62_RS21030 | Not Available | Negative | 52376 - 52885 | 19523.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
