Actinotignum schaalii str. CCUG 27420

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinotignum

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinotignum
SpeciesActinotignum schaalii
StrainCCUG 27420

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbladder
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Actinotignum schaalii strain CCUG 27420 chromosome, complete

Gene Summary

Adenine Count

407909 bp

Thymine Count

408485 bp

Guanine Count

674097 bp

Cytosine Count

668815 bp

Genome Length

2159306 bp

Protein-coding Genes

1758 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFB03_RS00010Not AvailablePositive417 - 6388388.31
sugar porter family mfs transporterFB03_RS00015Not AvailableNegative814 - 219349723.6
laci family dna-binding transcriptional regulatorFB03_RS00020Not AvailableNegative2407 - 343536654.3
fggy-family carbohydrate kinaseFB03_RS00025Not AvailablePositive3750 - 542959392.0
l-ribulose-5-phosphate 4-epimeraseFB03_RS00030Not AvailablePositive5426 - 612124821.7
l-arabinose isomeraseFB03_RS00035Not AvailablePositive6198 - 771256375.1
deor/glpr family dna-binding transcription regulatorFB03_RS00040Not AvailableNegative7952 - 872528422.3
substrate-binding domain-containing proteinFB03_RS00045Not AvailablePositive9058 - 1009236778.4
sugar abc transporter atp-binding proteinFB03_RS00050Not AvailablePositive10171 - 1167954269.5
helix-turn-helix domain-containing proteinFB03_RS00055Not AvailablePositive11760 - 1272533557.6

Displaying genes 1 – 10 of 1815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

Health ConditionRelationReference
EpididymitisCausesPMC7788979
Abscess formationCausesPMC7788979
Urinary tract infectionsCausesPMC7955795
BacteremiaCausesPMC7955795
SepsisCausesPMC7955795
Fournier's gangreneCausesPMC7955795
Actinotignum bacteremiaCausesPMC5395584
UtiCausesPMC6314084
Asymptomatic bacteriuria (asb)CausesPMC6314084
CautiCausesPMC6314084

Displaying health effects 1 – 10 of 10 in total