Citrobacter braakii str. SCC4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter braakii str. SCC4 is a Gram-negative bacterium characterized by its distinct cellular morphology and biochemical capabilities. As a member of the genus Citrobacter, this strain exhibits typical traits associated with enterobacterial species, although specific metabolic pathways and ecological roles may vary. The Gram-negative status of Citrobacter braakii str. SCC4 indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which contains lipopolysaccharides. This structural feature is significant as it influences the bacterium's response to environmental stresses and its interactions with other microbial communities. While specific data on its metabolic characteristics and habitat preferences are not provided, members of the Citrobacter genus are often found in diverse environments, including soil, water, and the gastrointestinal tracts of animals. This versatility suggests that Citrobacter braakii str. SCC4 may play a role in nutrient cycling within its ecosystem, potentially influencing the availability of organic compounds and interacting with other microbial populations. Understanding the traits of Citrobacter braakii str. SCC4 contributes to the broader knowledge of the Citrobacter genus and its ecological significance, particularly in environments where it may participate in complex microbial interactions and contribute to local biodiversity. Further studies are warranted to elucidate its functional roles and applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter braakii
StrainSCC4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter braakii str. SCC4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Oncorhynchus mykiss, Ictalurus punctatus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter braakii strain SCC4 plasmid pSCC4, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pap2 family proteinBWD41_RS00155Not AvailablePositive24491 - 2521326832.1
is30-like element isapl1 family transposaseBWD41_RS00160Not AvailablePositive25303 - 2627737701.3
virb4 family type iv secretion/conjugal transfer atpaseBWD41_RS00165Not AvailableNegative26299 - 2884294952.9
conjugal transfer protein trbdBWD41_RS00170Not AvailableNegative28839 - 2916512326.4
trbc/virb2 family proteinBWD41_RS00175Not AvailableNegative29168 - 2955113084.1
p-type conjugative transfer atpase trbbBWD41_RS00180Not AvailableNegative29665 - 3062135353.0
transcriptional regulatorBWD41_RS00185Not AvailableNegative30806 - 3121015070.5
single-stranded dna-binding proteinBWD41_RS00190Not AvailablePositive31316 - 314625481.56
plasmid replication initiator trfaBWD41_RS00195Not AvailablePositive31600 - 3247834282.0
type ii toxin-antitoxin system rele/pare family toxinBWD41_RS00200Not AvailablePositive33327 - 3362611335.5

Displaying genes 31 – 40 of 5405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.