Geobacter sp.

Gram-negative

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeobacter
SpeciesGeobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsubsurface environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Geobacter sp. isolate H2geo H2geo_doubleton_contig_23, whole

Gene Summary

Adenine Count

756004 bp

Thymine Count

766669 bp

Guanine Count

977503 bp

Cytosine Count

969776 bp

Genome Length

3469952 bp

Protein-coding Genes

3078 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCXR31_03345Not AvailableNegative720513 - 72099517579.0
atp-dependent dna helicase pcraCXR31_03350Not AvailablePositive721266 - 72353685530.8
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit cCXR31_03355Not AvailablePositive723692 - 72397910323.3
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit aCXR31_03360Not AvailablePositive724067 - 72552451818.1
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit bCXR31_03365Not AvailablePositive725697 - 72713652618.2
s-methyl-5-thioribose-1-phosphate isomeraseCXR31_03370Not AvailablePositive727316 - 72835637626.4
bifunctionalCXR31_03375Not AvailablePositive728353 - 731544119875.0
coa pyrophosphataseCXR31_03380Not AvailableNegative731763 - 73234722572.8
ribulose-phosphate 3-epimeraseCXR31_03385Not AvailableNegative732474 - 73313923788.8
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbCXR31_03390Not AvailableNegative733331 - 73467449576.4

Displaying genes 671 – 680 of 10600 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.