Crocosphaera subtropica ATCC 51142

Gram-negativeCocciNon-motileFacultative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Aphanothecaceae

Genus

Crocosphaera

Description

Crocosphaera subtropica ATCC 51142 is a Gram-negative, coccoid bacterium that typically exists as single cells in aquatic environments. This species is characterized by its facultative anaerobic metabolism, allowing it to thrive in both oxygen-rich and oxygen-poor conditions. The ability to adapt to varying oxygen levels suggests a versatile ecological role, potentially contributing to nutrient cycling and ecosystem functioning in aquatic habitats. As a member of the microbial community, Crocosphaera subtropica may play a significant part in the dynamics of primary production and organic matter decomposition. Its presence in diverse aquatic ecosystems highlights its potential importance in biogeochemical processes, particularly in subtropical regions where nutrient availability can vary. Further studies on this microbe could provide insights into its interactions within microbial consortia and its overall impact on aquatic ecosystem health and resilience.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyAphanothecaceae
GenusCrocosphaera
SpeciesCrocosphaera subtropica
StrainATCC 51142

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Crocosphaera subtropica ATCC 51142
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Crocosphaera subtropica ATCC 51142 chromosome circular, complete

Gene Summary

Adenine Count

1535862 bp

Thymine Count

1529534 bp

Guanine Count

934947 bp

Cytosine Count

933928 bp

Genome Length

4934271 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3987 domain-containing proteinCCE_RS24590Not AvailableNegative1 - 3621136674.0
hnh endonucleaseCCE_RS24595Not AvailableNegative4626 - 492811212.4
aaa family atpaseCCE_RS24600Not AvailablePositive5059 - 570323302.2
hypothetical proteinCCE_RS24605Not AvailablePositive5694 - 602912746.2
cbs domain-containing proteinCCE_RS24610Not AvailableNegative6096 - 672523675.6
adenosine-specific kinaseCCE_RS24615Not AvailablePositive7061 - 754317561.4
duf6940 family proteinCCE_RS24620Not AvailablePositive7595 - 826925828.8
crossover junction endodeoxyribonuclease ruvcCCE_RS24625Q55506Negative8353 - 898523667.3
is1096 element passenger tnpr family proteinCCE_RS24630Not AvailablePositive9032 - 1029748905.9
tyrosine-type recombinase/integraseCCE_RS24635O26979Negative10332 - 1119532492.3

Displaying genes 1 – 10 of 5092 in total

Metabolites

444 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 444 metabolites

Health Effects

No health effects information available for this bacterium.