Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Amphipoda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4124 domain-containing protein | SHEWBE_RS13190 | Not Available | Positive | 2884894 - 2885334 | 16576.6 |
| hypothetical protein | SHEWBE_RS13195 | Not Available | Positive | 2885549 - 2885878 | 12549.2 |
| hypothetical protein | SHEWBE_RS13200 | Not Available | Positive | 2885891 - 2886136 | 9759.69 |
| hypothetical protein | SHEWBE_RS13205 | Not Available | Positive | 2886138 - 2886578 | 16379.2 |
| Hypothetical protein | SHEWBE_RS13210 | Not Available | Positive | 2886575 - 2887111 | 20031.8 |
| Gp53 | SHEWBE_RS13215 | Not Available | Positive | 2887108 - 2887638 | 20428.0 |
| Transcriptional regulator | SHEWBE_RS13220 | Not Available | Positive | 2887635 - 2887958 | 11819.1 |
| Putative dna methyltransferase | SHEWBE_RS13225 | Not Available | Positive | 2887958 - 2888965 | 37767.3 |
| Putative methylase | SHEWBE_RS13230 | Not Available | Positive | 2888962 - 2890599 | 59611.8 |
| hypothetical protein | SHEWBE_RS13235 | Not Available | Positive | 2890627 - 2890830 | 7846.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
