Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Amphipoda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 2852783 - 2852795 | Not Available |
| Rna-directed dna polymerase | SHEWBE_RS13010 | Not Available | Negative | 2853336 - 2854328 | 37801.4 |
| Xre family transcriptional regulator | SHEWBE_RS13015 | Not Available | Negative | 2854303 - 2854614 | 11846.5 |
| hypothetical protein | SHEWBE_RS20030 | Not Available | Negative | 2854659 - 2854802 | 5705.78 |
| hypothetical protein | SHEWBE_RS13020 | Not Available | Negative | 2855431 - 2855862 | 16263.2 |
| Hypothetical protein | SHEWBE_RS13025 | Not Available | Negative | 2855887 - 2856099 | 7419.94 |
| Baseplate protein | SHEWBE_RS13030 | Not Available | Negative | 2856104 - 2857948 | 67324.9 |
| Hypothetical protein | SHEWBE_RS13035 | Not Available | Negative | 2857948 - 2858247 | 10766.0 |
| Tail assembly protein | SHEWBE_RS13040 | Not Available | Negative | 2858240 - 2859229 | 35948.2 |
| Putative tail protein b | SHEWBE_RS13045 | Not Available | Negative | 2859253 - 2861694 | 87634.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
