Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Amphipoda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS13145 | Not Available | Negative | 2879487 - 2879846 | 14022.9 |
| Helix-turn-helix transcriptional regulator | SHEWBE_RS13150 | Not Available | Negative | 2879836 - 2880054 | 7982.5 |
| Integrase | SHEWBE_RS13155 | Not Available | Negative | 2880110 - 2881360 | 47169.5 |
| hypothetical protein | SHEWBE_RS13160 | Not Available | Negative | 2881366 - 2881599 | 9130.88 |
| Putative replication protein p | SHEWBE_RS13165 | Not Available | Negative | 2881586 - 2882260 | 25308.3 |
| Replication protein | SHEWBE_RS13170 | Not Available | Negative | 2882257 - 2883000 | 27102.5 |
| Attr | Not Available | Not Available | Positive | 2883155 - 2883167 | Not Available |
| Hypothetical protein | SHEWBE_RS13175 | Not Available | Negative | 2883186 - 2883803 | 23244.9 |
| Hypothetical protein | SHEWBE_RS13180 | Not Available | Negative | 2883835 - 2884029 | 7075.44 |
| Putative cro/ci transcriptional regulator | SHEWBE_RS13185 | Not Available | Positive | 2884108 - 2884803 | 25844.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
