Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Amphipoda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase | SHEWBE_RS13100 | Not Available | Negative | 2872339 - 2874351 | 76056.5 |
| Gp1 | SHEWBE_RS13105 | Not Available | Negative | 2874326 - 2874859 | 19874.9 |
| Holin protein | SHEWBE_RS13110 | Not Available | Negative | 2874867 - 2875112 | 8741.58 |
| hypothetical protein | SHEWBE_RS13115 | Not Available | Negative | 2875226 - 2875729 | 18816.8 |
| Lysozyme | SHEWBE_RS13120 | Not Available | Negative | 2875731 - 2876204 | 17692.4 |
| Gp57 | SHEWBE_RS13125 | Not Available | Negative | 2876357 - 2876671 | 11443.0 |
| Peptidase | SHEWBE_RS13130 | Not Available | Negative | 2876876 - 2877325 | 16463.7 |
| hypothetical protein | SHEWBE_RS13135 | Not Available | Negative | 2877714 - 2878217 | 18612.1 |
| hypothetical protein | SHEWBE_RS13140 | Not Available | Negative | 2878214 - 2879371 | 42878.7 |
| Attl | Not Available | Not Available | Positive | 2879451 - 2879463 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
