Rhodococcus opacus str. 1CP

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus str. 1CP is a Gram-positive bacterium characterized by its cocci shape and filamentous cell arrangement. This microbe is an obligate aerobe, requiring oxygen for its metabolic processes. The filamentous arrangement of its cells suggests a potential for enhanced surface area, which may facilitate nutrient absorption and intercellular communication among individual cells. Rhodococcus species are well-known for their versatile metabolic capabilities, particularly in the degradation of a wide range of organic compounds. While the specific metabolic pathways of strain 1CP have not been detailed, its classification within the Rhodococcus genus implies an ability to adapt to various environmental conditions, which may include the degradation of pollutants. Additionally, the filamentous growth form may play a role in its ecological interactions, potentially allowing for biofilm formation or increased resilience in fluctuating environments. The presence of aerobic respiration mechanisms suggests a capacity for growth in oxygen-rich environments, which may position it as a significant player in soil microbiomes or other aerobic habitats. Further investigation into the metabolic pathways and ecological roles of Rhodococcus opacus str. 1CP could provide insights into its potential applications in bioremediation and industrial microbiology, highlighting the importance of this strain in biotechnological contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
Strain1CP

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus str. 1CP
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

801 genes

Non-Coding Genes

3 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4190 domain-containing proteinR1CP_RS34940Not AvailablePositive15752 - 1642322261.2
hypothetical proteinR1CP_RS34945Not AvailablePositive16498 - 167528555.51
zeta toxin family proteinR1CP_RS34950Not AvailableNegative17040 - 1786430291.8
winged helix-turn-helix domain-containing proteinR1CP_RS42935Not AvailableNegative17909 - 1837317768.8
n-formylglutamate amidohydrolaseR1CP_RS34960Not AvailablePositive18949 - 1944617577.8
yegp family proteinR1CP_RS34965Not AvailableNegative19644 - 198236176.23
hypothetical proteinR1CP_RS34970Not AvailableNegative20567 - 208309375.72
hypothetical proteinR1CP_RS34975Not AvailableNegative21066 - 2184829061.4
pyridoxamine 5'-phosphate oxidase family proteinR1CP_RS34980Not AvailableNegative22213 - 2251510614.6
hypothetical proteinR1CP_RS34985Not AvailablePositive22778 - 2339222441.0

Displaying genes 41 – 50 of 7995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.