Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:leu,anti_codon:taa; | Not Available | Not Available | Positive | 2175592 - 2175677 | Not Available |
| hypothetical protein | AO275_20450 | Not Available | Positive | 2176005 - 2176604 | 23008.1 |
| Sos response associated peptidase | AO275_20455 | Not Available | Positive | 2176617 - 2177312 | 26011.9 |
| hypothetical protein | AO275_20460 | Not Available | Negative | 2177449 - 2177709 | 9832.67 |
| hypothetical protein | AO275_20470 | Not Available | Negative | 2178513 - 2179190 | 25770.3 |
| Hypothetical protein | AO275_20475 | Not Available | Negative | 2179361 - 2179906 | 18836.1 |
| Glycoside hydrolase family 19 protein | AO275_20480 | Not Available | Negative | 2179903 - 2180448 | 19577.4 |
| Putative tail fiber protein | AO275_20485 | Not Available | Negative | 2180509 - 2181975 | 50915.8 |
| Hypothetical protein | AO275_20490 | Not Available | Negative | 2181992 - 2182858 | 30505.1 |
| Hypothetical protein | AO275_20495 | Not Available | Negative | 2182858 - 2183160 | 10799.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
