Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 2166582 - 2166594 | Not Available |
| Tyrosine-type recombinase/integrase | AO275_20400 | Not Available | Negative | 2166827 - 2167792 | 36549.7 |
| alcohol dehydrogenase | AO275_20405 | Not Available | Negative | 2168041 - 2169036 | 34632.8 |
| tetr family transcriptional regulator | AO275_20410 | Not Available | Negative | 2169081 - 2169725 | 24333.3 |
| 2-nitropropane dioxygenase | AO275_20415 | Not Available | Positive | 2169867 - 2170943 | 38026.9 |
| molybdate abc transporter substrate-binding protein | AO275_20420 | Not Available | Positive | 2171043 - 2171810 | 27070.3 |
| molybdenum abc transporter permease | AO275_20425 | Not Available | Positive | 2171811 - 2172491 | 23972.9 |
| Abc transporter | AO275_20430 | Not Available | Positive | 2172495 - 2173583 | 40004.5 |
| Putative topoisomerasae i protein | AO275_20435 | Not Available | Positive | 2173672 - 2174727 | 39706.8 |
| Helix-turn-helix transcriptional regulator | AO275_20440 | Not Available | Negative | 2174758 - 2175153 | 14116.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
