Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail/dna circulation protein | PviCFBP13507_24140 | Not Available | Negative | 5321059 - 5322504 | 50675.9 |
| Tail protein | PviCFBP13507_24145 | Not Available | Negative | 5322501 - 5324783 | 79939.7 |
| Putative bacteriophage protein | PviCFBP13507_24150 | Not Available | Negative | 5324914 - 5325210 | 10598.7 |
| Hypothetical protein | PviCFBP13507_24155 | Not Available | Negative | 5325207 - 5325554 | 12467.9 |
| Tail sheath protein | PviCFBP13507_24160 | Not Available | Negative | 5325622 - 5327118 | 53333.2 |
| Hypothetical protein | PviCFBP13507_24165 | Not Available | Negative | 5327137 - 5327322 | 6770.83 |
| Hypothetical protein | PviCFBP13507_24170 | Not Available | Negative | 5327319 - 5327909 | 21313.1 |
| Lipoprotein | PviCFBP13507_24175 | Not Available | Negative | 5327996 - 5328334 | 12252.6 |
| Holin | PviCFBP13507_24180 | Not Available | Negative | 5328315 - 5328704 | 14124.8 |
| hypothetical protein | PviCFBP13507_24185 | Not Available | Negative | 5329009 - 5329446 | 15913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
