Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Carbamoyl phosphate synthase small subunit | PviCFBP13507_24090 | Not Available | Negative | 5312968 - 5313567 | 21785.1 |
| Lysozyme | PviCFBP13507_24095 | Not Available | Negative | 5313965 - 5314474 | 18307.8 |
| Glycoside hydrolase family 19 protein | PviCFBP13507_24100 | Not Available | Negative | 5314471 - 5315016 | 19890.9 |
| Putative tail fiber assembly protein | PviCFBP13507_24105 | Not Available | Negative | 5315028 - 5315570 | 19834.3 |
| Tail protein | PviCFBP13507_24110 | Not Available | Negative | 5315588 - 5317417 | 64189.9 |
| Tail protein | PviCFBP13507_24115 | Not Available | Negative | 5317428 - 5318027 | 22311.7 |
| Baseplate protein | PviCFBP13507_24120 | Not Available | Negative | 5318015 - 5319055 | 36940.7 |
| Putative tail protein | PviCFBP13507_24125 | Not Available | Negative | 5319045 - 5319443 | 15312.1 |
| Putative base plate assembly protein | PviCFBP13507_24130 | Not Available | Negative | 5319443 - 5319952 | 17977.5 |
| Putative tail protein | PviCFBP13507_24135 | Not Available | Negative | 5319949 - 5321055 | 40075.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
