Flavobacterium succinicans str. DD5b

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium succinicans
StrainDD5b

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium succinicans str. DD5b
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatRimac river
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium succinicans strain DD5b FLB_contig000074, whole

Gene Summary

Adenine Count

1064428 bp

Thymine Count

1082912 bp

Guanine Count

589035 bp

Cytosine Count

578141 bp

Genome Length

3314516 bp

Protein-coding Genes

2813 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFLB_00490Not AvailablePositive54195 - 5456614815.9
uracil-dna glycosylaseFLB_00500A5FFT1Positive54559 - 5523025299.0
hypothetical proteinFLB_00510Not AvailableNegative55231 - 5560514239.3
alanine dehydrogenase 2FLB_00520Q2FG29Negative55642 - 5683543401.7
putative n-acetyltransferase yvbkFLB_00530Not AvailableNegative56915 - 5739118126.2
trna threonylcarbamoyladenosine biosynthesis protein tsaeFLB_00540O52749Negative57503 - 5791015476.6
transcriptional regulatory protein srraFLB_00550Q8X613Negative57995 - 5954860095.5
hd domain proteinFLB_00560P39651Positive59778 - 6100747351.8
udp-3-o-acylglucosamine n-acyltransferaseFLB_00570A0M2A1Positive61139 - 6217937211.2
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseFLB_00580Q8A015Positive62163 - 6356051532.8

Displaying genes 51 – 60 of 2855 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

172 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 172 metabolites

Health Effects

No health effects information available for this bacterium.