Flavobacterium saccharophilum

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium saccharophilum is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, with an optimal growth temperature of 25.0°C. This microbe is part of the Flavobacteriaceae family, known for its diverse metabolic capabilities, particularly in the degradation of complex carbohydrates. The Gram-negative nature of F. saccharophilum indicates the presence of a thin peptidoglycan layer and an outer membrane, which may play a role in its interactions with the environment and other microorganisms. The rod shape of F. saccharophilum contributes to its motility and surface attachment, which are vital for colonization and nutrient acquisition. As an aerobic organism, it relies on oxygen for its metabolic processes, suggesting a potential preference for environments where oxygen is readily available. This trait aligns with its capacity to break down polysaccharides, which are often found in organic-rich environments. The optimal temperature of 25.0°C indicates that F. saccharophilum is well-adapted to moderate climates, such as those encountered in soil or freshwater ecosystems. Given its carbohydrate-degrading abilities, F. saccharophilum likely plays a significant role in nutrient cycling within its habitat, contributing to the breakdown of organic matter and the recycling of essential elements. This positions it as an important player in the microbial community dynamics, particularly in environments where organic carbon is abundant.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium saccharophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium saccharophilum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatphycosphere of the cyanobacterium
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium saccharophilum strain DSM 1811 genome assembly,

Gene Summary

Adenine Count

1729430 bp

Thymine Count

1709758 bp

Guanine Count

867451 bp

Cytosine Count

902670 bp

Genome Length

5209309 bp

Protein-coding Genes

4388 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adp-ribose pyrophosphatase yjhb, nudix familySAMN05444366_0245Not AvailablePositive277998 - 27871427455.2
nudix domain-containing proteinSAMN05444366_0246Not AvailablePositive278738 - 27946928153.1
gtp-binding protein lepaSAMN05444366_0247Not AvailablePositive279634 - 28143066870.9
hypothetical proteinSAMN05444366_0248Not AvailableNegative281521 - 28201518767.8
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN05444366_0249Not AvailablePositive282542 - 28350137416.1
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN05444366_0250Not AvailableNegative283540 - 28403719238.8
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN05444366_0251Not AvailableNegative284090 - 28456918740.3
6-phosphofructokinase 2SAMN05444366_0252Not AvailableNegative284743 - 28567533258.9
thiamine-phosphate kinaseSAMN05444366_0253Not AvailablePositive285847 - 28689338541.9
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN05444366_0254Not AvailableNegative286980 - 28767826769.6

Displaying genes 241 – 250 of 4443 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.