Bifidobacterium pseudocatenulatum

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum is a gram-positive, rod-shaped bacterium that thrives in a thermophilic environment, characterized as mesophilic, with a temperature preference range of 25-45°C. As a heterotroph, it obtains its energy by breaking down complex organic molecules, specifically by fermenting carbohydrates and peptides. This microbe produces ATP through anaerobic fermentation of glucose, yielding lactate, acetate, and formate as byproducts. Bifidobacterium pseudocatenulatum is a ubiquitous microbe, colonizing various body sites, including the oral cavity, gut, vagina, and skin, in all species of mammals. It is an obligate anaerobe, unable to survive in the presence of oxygen, which necessitates the development of specialized membrane-bound enzymes to facilitate anaerobic metabolism. One of the distinctive features of Bifidobacterium pseudocatenulatum is its ability to produce various bioactive compounds, including conjugated linoleic acid, which exhibits immunomodulatory effects. Additionally, it has been associated with the production of antimicrobial peptides, contributing to its ability to inhibit the growth of pathogenic bacteria. In the context of human health, Bifidobacterium pseudocatenulatum is considered a beneficial microbe, playing a crucial role in maintaining gut homeostasis and immune system development. Furthermore, it has been linked to the alleviation of symptoms in patients suffering from irritable bowel syndrome (IBS), inflammatory bowel disease (IBD), and other gastrointestinal disorders.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain 2789STDY5834840 genome

Gene Summary

Adenine Count

503302 bp

Thymine Count

498081 bp

Guanine Count

652572 bp

Cytosine Count

647462 bp

Genome Length

2303871 bp

Protein-coding Genes

1947 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate synthetaseERS852455_00081Not AvailablePositive107620 - 10890646596.5
chloride transporter%2c clc familyERS852455_00082Not AvailablePositive108930 - 11051356003.5
integral membrane protein for chromosome condensationERS852455_00083Not AvailablePositive110541 - 11179443649.5
putative protein crcbERS852455_00084Not AvailablePositive111794 - 11218914231.7
proteinERS852455_00085Not AvailablePositive112278 - 1124696900.91
bacterial regulatory protein%2c laci familyERS852455_00086Not AvailablePositive112771 - 11385639280.0
sucrose phosphorylaseERS852455_00087Not AvailablePositive114081 - 11559555862.4
proteinERS852455_00088Not AvailablePositive115784 - 11644024745.4
oligo-1%2c6-glucosidaseERS852455_00089Not AvailableNegative116760 - 11863768510.0
sugar abc transporter substrate-binding proteinERS852455_00090Not AvailablePositive118977 - 12026347395.8

Displaying genes 81 – 90 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

26 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014055Linoleic acidC18H32O2Chemical structure of Linoleic acid60-33-3
Average280.4455Da
Monoisotopic280.240230268Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014087DextrinC18H32O16Chemical structure of Dextrin9004-53-9
Average504.4371Da
Monoisotopic504.169034976Da
BASm0014286N2,N6-DiacetyllysineC10H18N2O4Chemical structure of N2,N6-DiacetyllysineNULL
Average230.2609Da
Monoisotopic230.126657074Da
BASm0034653Starch, Structure 1 (1,6-{7[1,4-Glc], 4[1,4-Glc]})C66H112O56Chemical structure of Starch, Structure 1 (1,6-{7[1,4-Glc], 4[1,4-Glc]})NULL
Average1801.566Da
Monoisotopic1800.591622326Da
BASm0034763CholylmethionineC29H49NO6SChemical structure of CholylmethionineNULL
Average539.77Da
Monoisotopic539.328059476Da
BASm0034764Cholylglutamic acidC29H47NO8Chemical structure of Cholylglutamic acidNULL
Average537.694Da
Monoisotopic537.330167477Da
BASm0034765ChenodeoxycholylalanineC27H45NO5Chemical structure of ChenodeoxycholylalanineNULL
Average463.659Da
Monoisotopic463.329773553Da
BASm0034766ChenodeoxycholylphenylalanineC33H49NO5Chemical structure of ChenodeoxycholylphenylalanineNULL
Average539.757Da
Monoisotopic539.361073682Da
BASm0034767ChenodeoxycholylglycineC26H43NO5Chemical structure of ChenodeoxycholylglycineNULL
Average449.632Da
Monoisotopic449.314123489Da

Displaying 1–10 of 26 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total