Bifidobacterium pseudocatenulatum

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium pseudocatenulatum is a gram-positive, rod-shaped bacterium that thrives in a thermophilic environment, characterized as mesophilic, with a temperature preference range of 25-45°C. As a heterotroph, it obtains its energy by breaking down complex organic molecules, specifically by fermenting carbohydrates and peptides. This microbe produces ATP through anaerobic fermentation of glucose, yielding lactate, acetate, and formate as byproducts. Bifidobacterium pseudocatenulatum is a ubiquitous microbe, colonizing various body sites, including the oral cavity, gut, vagina, and skin, in all species of mammals. It is an obligate anaerobe, unable to survive in the presence of oxygen, which necessitates the development of specialized membrane-bound enzymes to facilitate anaerobic metabolism. One of the distinctive features of Bifidobacterium pseudocatenulatum is its ability to produce various bioactive compounds, including conjugated linoleic acid, which exhibits immunomodulatory effects. Additionally, it has been associated with the production of antimicrobial peptides, contributing to its ability to inhibit the growth of pathogenic bacteria. In the context of human health, Bifidobacterium pseudocatenulatum is considered a beneficial microbe, playing a crucial role in maintaining gut homeostasis and immune system development. Furthermore, it has been linked to the alleviation of symptoms in patients suffering from irritable bowel syndrome (IBS), inflammatory bowel disease (IBD), and other gastrointestinal disorders.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium pseudocatenulatum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium pseudocatenulatum
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tracts of adults and breastfed infants; gut; gut microbiomes; infant gut; infant gut microbiota; Vietnamese gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium pseudocatenulatum strain OF05-12 OF05-12.Scaf13,

Gene Summary

Adenine Count

513609 bp

Thymine Count

510968 bp

Guanine Count

677718 bp

Cytosine Count

667401 bp

Genome Length

2369746 bp

Protein-coding Genes

1857 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-glucosidaseERS852455_00001Not AvailableNegative585 - 3479105568.0
serine/threonine protein kinaseERS852455_00002Not AvailablePositive3911 - 594471169.6
protein-disulfide isomeraseERS852455_00003Not AvailablePositive6132 - 711536385.5
Trna-thrNot AvailableNot AvailablePositive7269 - 7343Not Available
g5 domain-containing proteinERS852455_00005Not AvailablePositive7619 - 910953330.8
dimethyladenosine transferaseERS852455_00006Not AvailablePositive9183 - 1011233489.8
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseERS852455_00007Not AvailablePositive10109 - 1101731806.4
proteinERS852455_00008Not AvailablePositive11061 - 1168422725.9
rna nucleotidyltransferaseERS852455_00009Not AvailableNegative11921 - 1338455671.4
phosphohydrolaseERS852455_00010Not AvailablePositive13428 - 1407824081.3

Displaying genes 1 – 10 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic infectionsCausesPMC8557894

Displaying health effects 1 – 1 of 1 in total