Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lytic tail protein | EBF16_RS00100 | Not Available | Negative | 21916 - 22662 | 26644.9 |
| Chromosome partitioning protein para | EBF16_RS00105 | Not Available | Positive | 23420 - 24082 | 23517.5 |
| chromosome partitioning protein parb | EBF16_RS00110 | Not Available | Positive | 24079 - 24372 | 10636.6 |
| Dna primase | EBF16_RS00115 | Not Available | Positive | 24425 - 25264 | 30755.2 |
| Putative dna modification methylase | EBF16_RS00120 | Not Available | Positive | 25322 - 27517 | 77594.1 |
| Phage xerd-like integrase | EBF16_RS00125 | Not Available | Positive | 27608 - 28840 | 46292.8 |
| Integrase | EBF16_RS00130 | Not Available | Positive | 28837 - 30192 | 51968.8 |
| Tyrosine-type recombinase/integrase | EBF16_RS00135 | Not Available | Positive | 30189 - 31193 | 37306.7 |
| Attr | Not Available | Not Available | Positive | 45360 - 45371 | Not Available |
| atp-binding protein | EBF16_RS00005 | Not Available | Positive | 16 - 417 | 15199.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
