Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae strain SJTF8 chromosome, complete genome.
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase is26 | EBF16_RS00055 | Not Available | Positive | 11693 - 12100 | 16601.9 |
| Transposase is26 | EBF16_RS00060 | Not Available | Positive | 12315 - 12677 | 13214.3 |
| G region invertase | EBF16_RS00065 | Not Available | Negative | 12649 - 13617 | 35802.4 |
| hypothetical protein | EBF16_RS00070 | Not Available | Positive | 14012 - 15175 | 43502.6 |
| Partitioning protein spyb | EBF16_RS00075 | Not Available | Negative | 15396 - 16415 | 37836.8 |
| hypothetical protein | EBF16_RS28350 | Not Available | Negative | 16790 - 17098 | 11362.9 |
| Plasmid partition protein sopa | EBF16_RS00080 | Not Available | Negative | 17095 - 18351 | 46684.0 |
| replication protein repa | EBF16_RS00085 | Not Available | Positive | 19040 - 20272 | 45834.1 |
| Dna adenine methyltransferase | EBF16_RS00090 | Not Available | Negative | 20626 - 21468 | 31150.8 |
| Attl | Not Available | Not Available | Positive | 21867 - 21878 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
