Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | EBF16_RS05055 | Not Available | Negative | 221654 - 222328 | 23414.3 |
| lipopolysaccharide assembly protein lapa domain-containing protein | EBF16_RS05060 | Not Available | Negative | 222325 - 222675 | 12590.8 |
| aldose 1-epimerase | EBF16_RS05065 | Not Available | Negative | 222744 - 223601 | 31282.1 |
| sugar porter family mfs transporter | EBF16_RS05070 | Not Available | Negative | 223598 - 225010 | 49073.7 |
| smp-30/gluconolactonase/lre family protein | EBF16_RS05075 | Not Available | Negative | 225040 - 225915 | 30881.5 |
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS05080 | Not Available | Negative | 225917 - 226675 | 27352.8 |
| fumarylacetoacetate hydrolase family protein | EBF16_RS05085 | Not Available | Negative | 226672 - 227820 | 40432.1 |
| hypothetical protein | EBF16_RS05090 | Not Available | Positive | 228044 - 228229 | 6388.67 |
| ef-hand domain-containing protein | EBF16_RS05095 | Not Available | Negative | 228369 - 228782 | 13953.3 |
| adenylosuccinate lyase | EBF16_RS05100 | Not Available | Positive | 229070 - 230386 | 48972.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
