Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | EBF16_RS05005 | Not Available | Positive | 209410 - 209778 | 13120.7 |
| ydch family protein | EBF16_RS05010 | Not Available | Negative | 210072 - 210230 | 5810.07 |
| ydch family protein | EBF16_RS05015 | Not Available | Positive | 210417 - 210596 | 6588.23 |
| duf1465 family protein | EBF16_RS05020 | Not Available | Positive | 210717 - 211187 | 17291.5 |
| autotransporter assembly complex protein tama | EBF16_RS05025 | Not Available | Positive | 211316 - 213334 | 72180.4 |
| translocation/assembly module tamb domain-containing protein | EBF16_RS05030 | Not Available | Positive | 213334 - 217539 | 147847.0 |
| l-serine ammonia-lyase | EBF16_RS05035 | Not Available | Positive | 217541 - 218935 | 48859.8 |
| outer membrane protein | EBF16_RS05040 | Not Available | Positive | 219113 - 219766 | 22987.6 |
| acyl-coa thioesterase | EBF16_RS05045 | Not Available | Positive | 219867 - 220289 | 15773.8 |
| glycoside hydrolase family 43 protein | EBF16_RS05050 | Not Available | Positive | 220496 - 221596 | 41155.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
