Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | EBF16_RS04960 | Not Available | Negative | 198222 - 199604 | 50470.4 |
| tonb-dependent receptor domain-containing protein | EBF16_RS04965 | Not Available | Negative | 199699 - 202524 | 99865.5 |
| potassium channel family protein | EBF16_RS04970 | Not Available | Negative | 202680 - 203738 | 38541.6 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | EBF16_RS04975 | Not Available | Negative | 203735 - 204838 | 37914.4 |
| 5'/3'-nucleotidase sure | EBF16_RS04980 | Not Available | Negative | 204898 - 205662 | 27254.5 |
| serine--trna ligase | EBF16_RS04985 | Not Available | Negative | 205681 - 206958 | 46086.6 |
| host attachment family protein | EBF16_RS04990 | Not Available | Positive | 207047 - 207487 | 16465.4 |
| hypothetical protein | EBF16_RS29545 | Not Available | Negative | 207544 - 207678 | 4684.9 |
| hypothetical protein | EBF16_RS04995 | Not Available | Positive | 207728 - 208348 | 21302.7 |
| rna polymerase-binding protein dksa | EBF16_RS05000 | Not Available | Positive | 208869 - 209333 | 17863.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
