Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1192 domain-containing protein | EBF16_RS04865 | Not Available | Negative | 181721 - 181918 | 7316.79 |
| nad(p)h-quinone oxidoreductase | EBF16_RS04870 | Not Available | Positive | 182021 - 183028 | 35393.9 |
| udp-2,3-diacylglucosamine diphosphatase | EBF16_RS04875 | Not Available | Positive | 183145 - 184008 | 32743.4 |
| glycosyltransferase family 4 protein | EBF16_RS04880 | Not Available | Positive | 184023 - 185051 | 36955.4 |
| duf1013 domain-containing protein | EBF16_RS04885 | Not Available | Positive | 185167 - 185850 | 25144.8 |
| long-chain-fatty-acid--coa ligase | EBF16_RS04890 | Not Available | Positive | 185999 - 187720 | 62444.2 |
| peptide-methionine (s)-s-oxide reductase msra | EBF16_RS04895 | Not Available | Positive | 187766 - 188299 | 19415.7 |
| hypothetical protein | EBF16_RS04900 | Not Available | Positive | 188413 - 188679 | 9771.86 |
| l-threonylcarbamoyladenylate synthase | EBF16_RS04905 | Not Available | Negative | 188694 - 189650 | 33517.5 |
| atp-binding protein | EBF16_RS04910 | Not Available | Positive | 189761 - 190576 | 29015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
