Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf885 domain-containing protein | EBF16_RS04815 | Not Available | Positive | 166502 - 168256 | 64909.5 |
| aconitate hydratase acna | EBF16_RS04820 | Not Available | Positive | 168575 - 171244 | 95775.0 |
| cbu_0592 family membrane protein | EBF16_RS04825 | Not Available | Positive | 171324 - 171581 | 9375.63 |
| cyclase family protein | EBF16_RS04830 | Not Available | Positive | 171578 - 172249 | 24283.8 |
| bax inhibitor-1/ycca family protein | EBF16_RS04835 | Not Available | Positive | 172373 - 173107 | 26290.8 |
| glutathione s-transferase family protein | EBF16_RS04840 | Not Available | Negative | 173189 - 173818 | 22572.9 |
| alpha/beta hydrolase family protein | EBF16_RS04845 | Not Available | Negative | 173881 - 175944 | 73595.5 |
| hypothetical protein | EBF16_RS04850 | Not Available | Negative | 176054 - 177289 | 42823.4 |
| esterase/lipase family protein | EBF16_RS04855 | Not Available | Negative | 177380 - 178039 | 24027.3 |
| atp-dependent clp protease atp-binding subunit clpa | EBF16_RS04860 | Not Available | Negative | 179243 - 181564 | 84946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
