Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | EBF16_RS04765 | Not Available | Positive | 159043 - 160446 | 50150.9 |
| amidohydrolase family protein | EBF16_RS04770 | Not Available | Positive | 160443 - 161756 | 44883.3 |
| hypothetical protein | EBF16_RS04775 | Not Available | Positive | 161885 - 162082 | 7180.39 |
| is5/is1182 family transposase | EBF16_RS04780 | Not Available | Positive | 162137 - 162223 | 3342.02 |
| cap domain-containing protein | EBF16_RS04785 | Not Available | Negative | 162333 - 162869 | 19440.8 |
| hypothetical protein | EBF16_RS04790 | Not Available | Negative | 162910 - 163914 | 36190.4 |
| sh3 domain-containing protein | EBF16_RS04795 | Not Available | Negative | 164383 - 164880 | 17552.1 |
| 2-hydroxyacid dehydrogenase | EBF16_RS04800 | Not Available | Positive | 164983 - 165981 | 35898.3 |
| duf1328 domain-containing protein | EBF16_RS04805 | Not Available | Positive | 166053 - 166238 | 6095.06 |
| duf5818 domain-containing protein | EBF16_RS04810 | Not Available | Positive | 166242 - 166445 | 7350.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
