Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS29540 | Not Available | Positive | 147955 - 148086 | 4730.87 |
| sigma-70 family rna polymerase sigma factor | EBF16_RS04720 | Not Available | Positive | 148229 - 148918 | 25240.6 |
| hypothetical protein | EBF16_RS04725 | Not Available | Positive | 149001 - 149258 | 9240.71 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | EBF16_RS04730 | Not Available | Positive | 149464 - 150852 | 52290.5 |
| xrta/pep-cterm system histidine kinase prsk | EBF16_RS04735 | Not Available | Positive | 150863 - 152944 | 75958.7 |
| pep-cterm-box response regulator transcription factor | EBF16_RS04740 | Not Available | Positive | 152944 - 154308 | 49576.8 |
| tetratricopeptide repeat protein | EBF16_RS04745 | Not Available | Positive | 154312 - 156327 | 70330.7 |
| gntr family transcriptional regulator | EBF16_RS04750 | Not Available | Negative | 156355 - 156699 | 12648.2 |
| nitroreductase | EBF16_RS04755 | Not Available | Negative | 156773 - 157351 | 21256.3 |
| peptide mfs transporter | EBF16_RS04760 | Not Available | Positive | 157517 - 159046 | 55395.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
