Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS28440 | Not Available | Positive | 137068 - 137421 | 12675.2 |
| co-chaperone groes | EBF16_RS04675 | Not Available | Positive | 138117 - 138404 | 10157.3 |
| chaperonin groel | EBF16_RS04680 | Not Available | Positive | 138461 - 140104 | 57667.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EBF16_RS04685 | Not Available | Positive | 140382 - 142373 | 72943.3 |
| crotonase/enoyl-coa hydratase family protein | EBF16_RS04690 | Not Available | Negative | 142377 - 143312 | 34412.2 |
| hypothetical protein | EBF16_RS04695 | Not Available | Positive | 143548 - 143730 | 6967.47 |
| trna guanosine(34) transglycosylase tgt | EBF16_RS04700 | Not Available | Positive | 143790 - 144920 | 41225.6 |
| sensor histidine kinase | EBF16_RS04705 | Not Available | Negative | 144928 - 146481 | 57066.1 |
| nepr family anti-sigma factor | EBF16_RS04710 | Not Available | Negative | 146541 - 146735 | 7203.6 |
| response regulator | EBF16_RS04715 | Not Available | Positive | 147068 - 147862 | 28661.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
