Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase family protein | EBF16_RS04525 | Not Available | Positive | 110834 - 111685 | 30248.3 |
| ribosome maturation protein rimp | EBF16_RS04530 | Not Available | Positive | 111831 - 112355 | 18983.6 |
| transcription termination factor nusa | EBF16_RS04535 | Not Available | Positive | 112369 - 113943 | 57966.9 |
| tautomerase family protein | EBF16_RS04540 | Not Available | Positive | 113950 - 114183 | 8103.56 |
| duf448 domain-containing protein | EBF16_RS04545 | Not Available | Positive | 114247 - 114960 | 24884.8 |
| translation initiation factor if-2 | EBF16_RS04550 | Not Available | Positive | 114970 - 117597 | 93652.6 |
| type ii toxin-antitoxin system rele family toxin | EBF16_RS04555 | Not Available | Positive | 117704 - 117928 | 8763.61 |
| helix-turn-helix domain-containing protein | EBF16_RS04560 | Not Available | Positive | 117925 - 118299 | 14006.0 |
| 30s ribosome-binding factor rbfa | EBF16_RS04565 | Not Available | Positive | 118302 - 118703 | 15126.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | EBF16_RS04570 | Not Available | Positive | 118735 - 119004 | 9755.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
