Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | EBF16_RS04425 | Not Available | Negative | 87705 - 88457 | 28195.6 |
| alpha/beta hydrolase | EBF16_RS04430 | Not Available | Negative | 88537 - 90126 | 57043.3 |
| hypothetical protein | EBF16_RS04435 | Not Available | Negative | 90126 - 90611 | 17352.0 |
| oxidoreductase | EBF16_RS04440 | Not Available | Negative | 90648 - 91493 | 29490.4 |
| tetr/acrr family transcriptional regulator | EBF16_RS04445 | Not Available | Positive | 91544 - 92137 | 20862.0 |
| helix-turn-helix domain-containing protein | EBF16_RS04450 | Not Available | Negative | 92166 - 93047 | 32038.5 |
| 4-hydroxybenzoate 3-monooxygenase | EBF16_RS04455 | Not Available | Positive | 93199 - 94380 | 43303.4 |
| nudix domain-containing protein | EBF16_RS04460 | Not Available | Positive | 94437 - 95207 | 27166.2 |
| extensin family protein | EBF16_RS04465 | Not Available | Positive | 95211 - 95939 | 26412.8 |
| anthranilate synthase component i | EBF16_RS04470 | Not Available | Negative | 96052 - 97575 | 53891.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
