Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isovaleryl-coa dehydrogenase | EBF16_RS04375 | Not Available | Positive | 78138 - 79283 | 40907.2 |
| dmt family protein | EBF16_RS04380 | Not Available | Negative | 79414 - 79752 | 12361.7 |
| carboxyl transferase domain-containing protein | EBF16_RS04385 | Not Available | Positive | 79792 - 81393 | 57158.2 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | EBF16_RS04390 | Not Available | Positive | 81474 - 83315 | 64941.3 |
| maoc family dehydratase | EBF16_RS04395 | Not Available | Positive | 83378 - 83830 | 16790.3 |
| hpch/hpai aldolase/citrate lyase family protein | EBF16_RS04400 | Not Available | Positive | 83827 - 84660 | 28872.8 |
| duf2171 domain-containing protein | EBF16_RS04405 | Not Available | Negative | 84710 - 85621 | 35323.5 |
| Trna-ala | Not Available | Not Available | Positive | 85879 - 85954 | Not Available |
| aldo/keto reductase | EBF16_RS04415 | Not Available | Negative | 86076 - 86972 | 32124.7 |
| hypothetical protein | EBF16_RS04420 | Not Available | Negative | 87066 - 87620 | 20051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
