Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | EBF16_RS04325 | Not Available | Negative | 70080 - 70415 | 11623.7 |
| hypothetical protein | EBF16_RS04330 | Not Available | Negative | 70594 - 70977 | 13336.9 |
| exodeoxyribonuclease vii small subunit | EBF16_RS04335 | Not Available | Positive | 71168 - 71425 | 9235.79 |
| polyprenyl synthetase family protein | EBF16_RS04340 | Not Available | Positive | 71434 - 72339 | 32199.7 |
| pantetheine-phosphate adenylyltransferase | EBF16_RS04345 | Not Available | Positive | 72343 - 72855 | 18723.8 |
| peptidylprolyl isomerase | EBF16_RS04350 | Not Available | Positive | 72976 - 73749 | 27109.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EBF16_RS04355 | Not Available | Positive | 73775 - 74803 | 37532.8 |
| bama/tama family outer membrane protein | EBF16_RS04360 | Not Available | Negative | 74820 - 75965 | 40682.2 |
| duf4239 domain-containing protein | EBF16_RS04365 | Not Available | Positive | 76338 - 77183 | 30484.6 |
| lysr family transcriptional regulator | EBF16_RS04370 | Not Available | Negative | 77180 - 78052 | 31637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
