Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | EBF16_RS04225 | Not Available | Positive | 52313 - 52981 | 22816.2 |
| 3-hydroxyacyl-acp dehydratase fabz | EBF16_RS04230 | Not Available | Positive | 52986 - 53465 | 17071.1 |
| 50s ribosomal protein l31 | EBF16_RS04235 | Not Available | Positive | 53580 - 53804 | 8269.71 |
| 3-dehydroquinate synthase | EBF16_RS04240 | Not Available | Negative | 54181 - 55290 | 39142.0 |
| shikimate kinase | EBF16_RS04245 | Not Available | Negative | 55281 - 55829 | 20130.5 |
| hypothetical protein | EBF16_RS04250 | Not Available | Positive | 55924 - 56109 | 6705.37 |
| hypothetical protein | EBF16_RS04255 | Not Available | Positive | 56115 - 57944 | 63761.8 |
| tyrosine recombinase | EBF16_RS04260 | Not Available | Positive | 57959 - 58888 | 33252.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EBF16_RS04265 | Not Available | Positive | 58900 - 59844 | 33506.2 |
| m48 family metalloprotease | EBF16_RS04270 | Not Available | Positive | 59926 - 61404 | 51913.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
