Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS04175 | Not Available | Negative | 41918 - 42154 | 8379.46 |
| 30s ribosomal protein s2 | EBF16_RS04180 | Not Available | Positive | 42412 - 43170 | 27262.7 |
| translation elongation factor ts | EBF16_RS04185 | Not Available | Positive | 43276 - 44202 | 31619.7 |
| ump kinase | EBF16_RS04190 | Not Available | Positive | 44429 - 45154 | 25755.1 |
| ribosome recycling factor | EBF16_RS04195 | Not Available | Positive | 45157 - 45714 | 20227.3 |
| isoprenyl transferase | EBF16_RS04200 | Not Available | Positive | 45758 - 46498 | 27107.6 |
| phosphatidate cytidylyltransferase | EBF16_RS04205 | Not Available | Positive | 46504 - 47280 | 26773.8 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EBF16_RS04210 | Not Available | Positive | 47280 - 48437 | 39766.0 |
| rip metalloprotease rsep | EBF16_RS04215 | Not Available | Positive | 48434 - 49567 | 40648.0 |
| outer membrane protein assembly factor bama | EBF16_RS04220 | Not Available | Positive | 49656 - 52313 | 98386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
