Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EBF16_RS04125 | Not Available | Negative | 30223 - 31374 | 41126.9 |
| enoyl-coa hydratase-related protein | EBF16_RS04130 | Not Available | Negative | 31520 - 32281 | 26944.5 |
| had family hydrolase | EBF16_RS04135 | Not Available | Negative | 32278 - 32946 | 23547.5 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | EBF16_RS04140 | Not Available | Positive | 33101 - 34393 | 44946.0 |
| metallophosphoesterase | EBF16_RS04145 | Not Available | Positive | 34390 - 35253 | 30888.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | EBF16_RS04150 | Not Available | Positive | 35370 - 37193 | 65276.7 |
| bifunctional gnat family n-acetyltransferase/carbon-nitrogen hydrolase family protein | EBF16_RS04155 | Not Available | Negative | 37248 - 38861 | 59851.0 |
| nadp-dependent isocitrate dehydrogenase | EBF16_RS04160 | Not Available | Negative | 38981 - 40201 | 45485.3 |
| phosphatidylserine decarboxylase | EBF16_RS04165 | Not Available | Positive | 40405 - 41139 | 26482.6 |
| cdp-alcohol phosphatidyltransferase family protein | EBF16_RS04170 | Not Available | Positive | 41190 - 41903 | 25870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
