Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase-related protein | EBF16_RS04025 | Not Available | Negative | 5703 - 8627 | 104803.0 |
| m23 family metallopeptidase | EBF16_RS04030 | Not Available | Positive | 8913 - 10397 | 52443.0 |
| nucleotidyltransferase family protein | EBF16_RS04035 | Not Available | Positive | 10438 - 11229 | 28348.7 |
| hypothetical protein | EBF16_RS04040 | Not Available | Positive | 11351 - 11707 | 12452.2 |
| lipopolysaccharide biosynthesis protein | EBF16_RS04045 | Not Available | Negative | 11803 - 13149 | 47024.9 |
| sugar phosphate nucleotidyltransferase | EBF16_RS04050 | Not Available | Positive | 13276 - 14046 | 28407.0 |
| bama/tama family outer membrane protein | EBF16_RS04055 | Not Available | Negative | 14303 - 15481 | 42177.2 |
| outer membrane beta-barrel protein | EBF16_RS04060 | Not Available | Positive | 15659 - 16687 | 36641.0 |
| hit family protein | EBF16_RS04065 | Not Available | Negative | 16712 - 17143 | 15331.4 |
| cdp-alcohol phosphatidyltransferase family protein | EBF16_RS04070 | Not Available | Negative | 17140 - 18243 | 41006.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
