Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp350 | EBF16_RS27400 | Not Available | Positive | 4978760 - 4979752 | 36200.4 |
| trna pseudouridine(38-40) synthase trua | EBF16_RS27405 | Not Available | Negative | 4979725 - 4980483 | 27833.4 |
| Cyanobacterial phosphoribosylglycinamide formyltransferase | EBF16_RS27410 | Not Available | Negative | 4980488 - 4981396 | 32067.6 |
| Attr | Not Available | Not Available | Positive | 4993276 - 4993289 | Not Available |
| hdaa/dnaa family protein | EBF16_RS03995 | Not Available | Negative | 101 - 733 | 22813.2 |
| hypothetical protein | EBF16_RS04000 | Not Available | Negative | 730 - 2013 | 45306.1 |
| phosphoribosylformylglycinamidine cyclo-ligase | EBF16_RS04005 | Not Available | Positive | 2210 - 3304 | 37995.4 |
| phosphoribosylglycinamide formyltransferase | EBF16_RS04010 | Not Available | Positive | 3421 - 4371 | 34373.2 |
| mipa/ompv family protein | EBF16_RS04015 | Not Available | Positive | 4574 - 5365 | 27443.0 |
| rna-binding s4 domain-containing protein | EBF16_RS04020 | Not Available | Negative | 5387 - 5683 | 10641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
